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| author | Roel Janssen <roel@gnu.org> | 2024-09-10 21:19:50 +0200 |
|---|---|---|
| committer | Guix Patches Tester <> | 2024-09-10 22:58:11 +0200 |
| commit | f6c325ef6ed8cdcef1b3557d5d431b4800ec2c41 (patch) | |
| tree | 06d48a0922627ac339164a25f7cd87759805d027 | |
| parent | f977cb2b609f7122db2cf026cac5ab9d6d44a206 (diff) | |
| download | guix-patches-issue-73173.tar guix-patches-issue-73173.tar.gz | |
gnu: Update python-rdflib to 7.0.0.issue-73173
* gnu/packages/rdf.scm: Add updated recipe for python-rdflib; Keep
python-rdflib-6 for compatibility.
* gnu/packages/python-xyz.scm: Build python-prov with python-rdflib-6 because
rdflib-7 is not supported.
* gnu/packages/bioinformatics.scm: Build cwltool with python-rdflib-6 because
it fails to build with rdflib-7.
Change-Id: Ibc40c16ede20e69e702915488d6b2f0a7e70b868
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 2 | ||||
| -rw-r--r-- | gnu/packages/python-xyz.scm | 2 | ||||
| -rw-r--r-- | gnu/packages/rdf.scm | 43 |
3 files changed, 45 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 4653360792..db8befd144 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5786,7 +5786,7 @@ documents.") python-prov python-pydot python-psutil - python-rdflib + python-rdflib-6 python-requests python-ruamel.yaml python-schema-salad diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 9dd963e396..3dbb3edacd 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -24998,7 +24998,7 @@ manipulation, or @code{stdout}.") (("\\.serialize\\(format=\"nt\"\\)") ".serialize(format=\"nt\", encoding=\"utf-8\")"))))))) (propagated-inputs - (list python-dateutil python-lxml python-networkx python-rdflib)) + (list python-dateutil python-lxml python-networkx python-rdflib-6)) (native-inputs (list graphviz python-pydot)) (home-page "https://github.com/trungdong/prov") diff --git a/gnu/packages/rdf.scm b/gnu/packages/rdf.scm index f10b530861..9a02a71d81 100644 --- a/gnu/packages/rdf.scm +++ b/gnu/packages/rdf.scm @@ -330,6 +330,49 @@ ideal (e.g. in LV2 implementations or embedded applications).") (define-public python-rdflib (package (name "python-rdflib") + (version "7.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rdflib" version)) + (sha256 + (base32 + "1blmx4v003afr3l9qg84ymj0sldcbsr2dzdgq6w5k022d62yp5cr")))) + (build-system pyproject-build-system) + (arguments + '(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'adjust-tests + (lambda _ + (for-each delete-file + '(;; The tests in this file miss a test fixture. + ;; fixture 'no_cover' not found + "test/test_misc/test_plugins.py" + ;; These tests need internet access. + "test/jsonld/test_onedotone.py" + "test/test_examples.py" + "test/test_extras/test_infixowl/test_basic.py" + "test/test_extras/test_infixowl/test_context.py" + "test/test_sparql/test_service.py")))) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-vv" "test/"))))))) + (native-inputs + (list python-pytest python-poetry-core)) + (propagated-inputs + (list python-html5lib python-isodate python-pyparsing)) + (home-page "https://github.com/RDFLib/rdflib") + (synopsis "Python RDF library") + (description + "RDFLib is a Python library for working with RDF, a simple yet +powerful language for representing information.") + (license (license:non-copyleft "file://LICENSE" + "See LICENSE in the distribution.")))) + +(define-public python-rdflib-6 + (package + (name "python-rdflib") (version "6.1.1") (source (origin |